CDS

Accession Number TCMCG006C35031
gbkey CDS
Protein Id XP_013750833.1
Location complement(join(16925731..16925982,16926070..16926202,16926320..16926596,16926678..16926819,16926896..16927093,16927169..16927324,16927412..16927582,16927666..16927807,16927889..16928008,16928076..16928192,16928311..16928376,16928460..16928581,16928738..16928883,16929042..16929087))
Gene LOC106453127
GeneID 106453127
Organism Brassica napus

Protein

Length 695aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013895379.2
Definition probable rhamnogalacturonate lyase B [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Polysaccharide lyase family 4, domain II
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGTTTCTGTTCTCTTCACGTGTTTTTCATCTCGTGACGACCACAGGTTACCGGAGACACTTATTGAGACAAAAAGGATGGATGATTGCTTTGATCATGCTCTTGTCTTTGTTTGAGATTGTCATCTCCCAGAACCAAAGTTATGATCCAGAAACAATACAAGTCTTGCAATTACTTTACCAAGATGGGCATGTGGTGATTGACAATGGAATTTTCCAATTAACTTTGTCTAATCCTGAGGGATTTGTGACCGGAGTCCGGTACAACGGTATCGAAAATGTGCTTGCCTATACCGGCCATGAAAATGATAGAGGTTACTGGGACTTAGTGTGGAACTTTCCAGGAAAGAAAACTAAAAAGACCAAAGGCACACTAGACCGGATTGAAGCAACAAAGATGGAAGTGATAACGCAGAACGATGAACAGATAGAGATATCGTTTTCTAGGACATGGAATGCTTCTTCAAATGTGACTGTTCCAGTGAATATAGACAAGAGGTTTGTAGTGCTGCGAAACTCGTCAGGGTTCTACACTTATGCCATCTTCGAGAGGTTACAAGGGTGGCCTGCTGTTGAAATCGATAATATTCGATTAGCAATTAAGCTAGACAAGGACAAGTTTGATTACATGGCGATTTCAGATGAGAGGCAAAGGTACATGCCTCTGCCAGATGATAGGATTCCGCCTCGAGGTAAGCCTCTTGCTTACCCCGAGGCCGTTCAACTTCTAGACCCTGTTGAGCCTGAGTTTAAAGGAGACGTGGATGACAAGTATGAATACTCAATGGAGAGTAAAGACATAAAAGTTCATGGATGGATAAGCACAAATGACTCAGTTGGGTTCTGGCAGATCACTCCAAGCAACGAGTTCCGATCTGCTGGTCCACTCAAGCAGTTCCTAGGCTCACATGTTGGTCCAACCAACCTCGCTATATTTCATAGTACTCACTATGTTGGAGAAGATCTAATCATGAAATTTGAAGAAGGTGAAGCATGGAAGAAAGTATTTGGACCTGTCTTTATTTATCTCAACTCTTTCCCTAAAGAAGTTGATCCTCTCTTGCTCTGGCTTGAAGCCAAGAACCAGACAAAGATTGAAGAAGAGAAGTGGCCTTATAACTTCACAAATTCAAGTGATTTTCCTGCTTCTGACCAAAGAGGACATGTTAGCGGTAGATTACTCGTTAGAGACCGGTACATAAGCAGTGAGGATATACCTGCAAACGGTTCCTGCTTGGGGTTAGCTGCACCAGGAGATGTTGGCGCATGGCAAAGAGAATACAAAGGTTACCAGTTCTGGTCAAAGGCGGACGAAGAAGGATACTTTTGTATAAACAATGTGAGAAGTGGTCGTTACAATCTCTATGCATTTGCTCCTGGATTCATCGGTGATTACCACAACGAGACCGTTATCGACATTTCTCCAGGTTCGAATATATGCCTAGGAGAGTTGGTGTATGAACCTCCAAGAGACGGTCCAACTCTATGGGAAATTGGTGTACCAGACCGAACCGCTGCAGAGTTCTACATTCCTGACCCTAACCCAATGTTTGTGAACAAACTATACGTAAACAGTTCTGAAAATAAATACAGACAGTATGGATTATGGGAACGGTATTCAGAATTGTACCCCGATGAAGATATGGTCTACGATGTCGATGTTGATGATTACTCTAAAGATTGGTTCTACATGCAAGTCACAAGGAAGCTAGATGATGGAGGATACAACGGTACTACATGGGAGATCAAATTTCAATTTGACGATCAAATGGAAAATCTTACGGGAGATTTCAAACTGCGAATCGCTCTAGCCACATCAAATGTAGCAGAGTTGCAGGTTCGGGTGAACAATGTTTCTGTGGATCCTCCATTGTTTACAACGGGACAAATAGGAAAAGATAATACAATTGCAAGACATGGTATTCATGGACTCTATTGGTTATACAGTGTGGATGTACCAGCTTCTTCTCTTTGCCCGGGAAATAACTCAATATATCTAACCCAACCGCTAGCCATAAGCCCATTTCAAGGATTCATGTACGATTACATTCGTCTAGAGTATCCTGATTCTGTTAATCATATTACTTAG
Protein:  
MFLFSSRVFHLVTTTGYRRHLLRQKGWMIALIMLLSLFEIVISQNQSYDPETIQVLQLLYQDGHVVIDNGIFQLTLSNPEGFVTGVRYNGIENVLAYTGHENDRGYWDLVWNFPGKKTKKTKGTLDRIEATKMEVITQNDEQIEISFSRTWNASSNVTVPVNIDKRFVVLRNSSGFYTYAIFERLQGWPAVEIDNIRLAIKLDKDKFDYMAISDERQRYMPLPDDRIPPRGKPLAYPEAVQLLDPVEPEFKGDVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFLGSHVGPTNLAIFHSTHYVGEDLIMKFEEGEAWKKVFGPVFIYLNSFPKEVDPLLLWLEAKNQTKIEEEKWPYNFTNSSDFPASDQRGHVSGRLLVRDRYISSEDIPANGSCLGLAAPGDVGAWQREYKGYQFWSKADEEGYFCINNVRSGRYNLYAFAPGFIGDYHNETVIDISPGSNICLGELVYEPPRDGPTLWEIGVPDRTAAEFYIPDPNPMFVNKLYVNSSENKYRQYGLWERYSELYPDEDMVYDVDVDDYSKDWFYMQVTRKLDDGGYNGTTWEIKFQFDDQMENLTGDFKLRIALATSNVAELQVRVNNVSVDPPLFTTGQIGKDNTIARHGIHGLYWLYSVDVPASSLCPGNNSIYLTQPLAISPFQGFMYDYIRLEYPDSVNHIT